Krebs Cycle- Definition, Reactions, and Steps

Krebs cycle is the most common route for the complete oxidation of carbohydrates, proteins, and lipids. Krebs cycle was discovered by H.A. Kreb, who received the Nobel prize in 1953.

Krebs Cycle
Krebs Cycle

The Krebs cycle is also known as the TCA cycle (tricarboxylic acid cycle) or the Citric acid cycle. It is a series of enzyme-catalyzed reactions that occur in the mitochondrial matrix and involve the oxidation of acetyl-CoA to form carbon dioxide.

Reactions involve in Krebs cycle

It is an eight-step enzymatic process that occurs in the matrix of mitochondria under aerobic conditions.

kreb cycle

Step 1: Condensation reaction

The first step of the Krebs cycle involves the condensation reaction between the oxaloacetate (four carbon unit) and acetyl group of acetyl CoA (two carbon unit).  Oxaloacetate reacts with acetyl CoA in presence of H2O to give citrate (6C) and CoA. This reaction involves the condensation process followed by hydrolysis and is catalyzed by the enzyme citrate synthase.

Steps 2a and 2b: Isomerization reaction

In this reaction, the water is removed from the citrate and added back. This moves the hydroxyl group from one carbon atom to its neighbor. So isocitrate is formed from citrate by isomerization. The enzyme aconitase catalyzes this reaction.

Step 3: Oxidative decarboxylation of isocitrate

Isocitrate is oxidized and decarboxylated to alpha-ketoglutarate (5C). In this step, the carbon-carrying hydroxyl group is converted into the carbonyl group. Thus, the formed immediate product is unstable and loses CO2to give the product. The enzyme isocitrate dehydrogenase catalyzes this reaction.

Step 4: Oxidative decarboxylation of alpha-ketoglutarate

Oxidative decarboxylation of alpha-ketoglutarate produces succinyl CoA (4C). The enzyme alpha-ketoglutarate dehydrogenase catalyzes this reaction to produce NADH, CO2, and high-energy thioester bond to coenzyme A.

Step 5: Substrate level phosphorylation

 The enzyme succinate thiokinase catalyzes the conversion of succinyl CoA to succinate. This reaction yields a compound with high phosphoryl transfer potential through the substrate level phosphorylation.

Step 6: Oxidation

In this step, FAD removes two hydrogen atoms from the succinate to produce fumarate. The enzyme succinate dehydrogenase catalyzes this reaction.

Step 7: Hydration

The addition of water to fumarate places the hydroxyl group next to the carbonyl carbon to give malate.

Step 8: Oxidation

The carbon-containing hydroxyl group in malate is converted into a carbonyl group, regenerating oxaloacetate.

Net reaction of Kreb cycle

The oxidative decarboxylation of two pyruvates yields two molecules of Acetyl CoA, requiring two cycles per glucose molecule. In the Krebs cycle, complete oxidation of a glucose molecule yields four CO2, six NADH, two FADH2, and two ATPs.

net reaction of TCA

References

  1. https://www.khanacademy.org/science/biology/cellular-respiration-and-fermentation/pyruvate-oxidation-and-the-citric-acid-cycle/a/the-citric-acid-cycle
  2. https://biologydictionary.net/krebs-cycle/
  3. https://byjus.com/neet/krebs-cycle/
  4. https://byjus.com/biology/tca-cycle/
  5. https://www.britannica.com/science/tricarboxylic-acid-cycle
  6. https://www.vedantu.com/biology/krebs-cycle
  7. https://microbiologyinfo.com/krebs-citric-acid-cycle-steps-by-steps-explanation/

About Author

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Kabita Sharma

Kabita Sharma is a Ph.D. student in the Department of Chemistry at the University of North Texas, USA. Her research focuses on understanding protein degradation mediated by PROTAC (Proteolysis-Targeting Chimera) molecules and on exploring their potential for targeted protein degradation to treat diseases such as cancer. Through this work, she aims to advance drug discovery by targeting previously inaccessible or undruggable sites where PROTAC molecules can operate effectively. Additionally, she is analyzing how the buried surface area of proteins affects their binding and unbinding affinities. Using computational tools, she explores the challenges of removing one infected protein from another during treatment. Driven by a passion for solving complex scientific challenges, Kabita uses her knowledge in chemistry, chemical biology, and computational tools to advance her research. Beyond her academic pursuits, she aspires to inspire others toward science and its wonders through writing and sharing her knowledge.

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